[Datasets and Icicle]
Lemieux S. et al., NAR, 2017. | GitHub

Datasets

Click on a row to select the default log-transformed dataset or click on the desired data transformation
Dataset tissue project technology other n Icicle
AML NK leucegene rnaseq [+] Blood AML Leucegene RNA-Seq Normal karyotype 48 log
AML leucegene rnaseq [+] Blood AML Leucegene RNA-Seq 152 log
CD34pCD34pCD45RAn leucegene rnaseq [+] CD34+ Leucegene related RNA-Seq DSP068 17 log
COAD tumour TCGA rnaseq [+] Colon TCGA RNA-Seq tumour, adenocarcinoma, [COAD] 192 log
KIRC normal TCGA rnaseq [+] Kidney TCGA RNA-Seq normal, [KIRC] 68 log
KIRC tumour TCGA rnaseq [+] Kidney TCGA RNA-Seq tumour, [KIRC] 470 log
LAML tumour TCGA rnaseq [+] Blood AML TCGA RNA-Seq tumour, [LAML] 179 log
LAML tumour NK TCGA rnaseq [+] Blood AML TCGA RNA-Seq tumour, karyotype nk, [LAML] 89 log
LUAD normal TCGA rnaseq [+] Lung TCGA RNA-Seq normal, [LUAD] 37 log
LUAD tumour TCGA rnaseq [+] Lung TCGA RNA-Seq tumour, adenocarcinoma, [LUAD] 129 log
BRCA normal TCGA rnaseq [+] Breast TCGA RNA-Seq normal, [BRCA] 102 log
BRCA tumour TCGA rnaseq [+] Breast TCGA RNA-Seq tumour, invasive carcinoma, [BRCA] 754 log
BRCA tumour TCGA rnaseq ERpos [+] Breast TCGA RNA-Seq tumour ERpos, invasive carcinoma, [BRCA] 553 log
BRCA tumour TCGA rnaseq ERneg [+] Breast TCGA RNA-Seq tumour ERneg, invasive carcinoma, [BRCA] 165 log
BRCA tumour TCGA rnaseq HER2pos [+] Breast TCGA RNA-Seq tumour HER2pos, invasive carcinoma, [BRCA] 105 log
BRCA tumour TCGA rnaseq HER2neg [+] Breast TCGA RNA-Seq tumour HER2neg, invasive carcinoma, [BRCA] 606 log
BRCA tumour TCGA rnaseq Triple Negative [+] Breast TCGA RNA-Seq tumour Triple Neg., invasive carcinoma, [BRCA] 117 log
BRCA tumour TCGA rnaseq NOT Triple Negative [+] Breast TCGA RNA-Seq tumour NOT Triple Neg., invasive carcinoma, [BRCA] 637 log
BRCA tumour TCGA rnaseq Luminal A [+] Breast TCGA RNA-Seq tumour Lum. A, invasive carcinoma, [BRCA] 276 log
BRCA tumour TCGA rnaseq Luminal B [+] Breast TCGA RNA-Seq tumour Lum. B, invasive carcinoma, [BRCA] 192 log
BRCA miRNA coding normal rnaseq [+] Breast TCGA miRNA-Seq and RNA-Seq normal [BRCA] 80 log
BRCA miRNA normal rnaseq [+] Breast TCGA miRNA-Seq normal [BRCA] 87 log
BRCA miRNA coding tumor rnaseq [+] Breast TCGA miRNA-Seq and RNA-Seq tumour [BRCA] 440 log
BRCA miRNA tumor rnaseq [+] Breast TCGA miRNA-Seq tumour [BRCA] 659 log
CCLE [+] Cancer cell lines Other Microarrays Data is RMA log2 signal intensity (GSE36133) 917 log
GNE_VSD [+] Cancer cell lines Other RNA-Seq Original data is variance stabilized data 675 none
GNE_RPKM [+] Cancer cell lines Other RNA-Seq None 675 log none